Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 BASP1P1-201ENST00000430708 665 ntBASIC20.96■□□□□ 0.95
CNTNAP1P78357 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 AL606495.2-201ENST00000605867 535 ntBASIC20.96■□□□□ 0.95
CNTNAP1P78357 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP1P78357 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP1P78357 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.95■□□□□ 0.94
CNTNAP1P78357 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP1P78357 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP1P78357 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 FAM207CP-201ENST00000443486 507 ntBASIC20.94■□□□□ 0.94
CNTNAP1P78357 AC074386.1-202ENST00000463561 864 ntBASIC20.94■□□□□ 0.94
CNTNAP1P78357 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 CR383656.12-201ENST00000549567 513 ntBASIC20.94■□□□□ 0.94
CNTNAP1P78357 AC096734.2-201ENST00000562054 433 ntBASIC20.94■□□□□ 0.94
CNTNAP1P78357 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP1P78357 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTNAP1P78357 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 AL096828.2-201ENST00000567259 1965 ntBASIC20.93■□□□□ 0.94
CNTNAP1P78357 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 KLF4P1-201ENST00000412782 1185 ntBASIC20.93■□□□□ 0.94
CNTNAP1P78357 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 AC010654.1-201ENST00000615722 808 ntBASIC20.93■□□□□ 0.94
CNTNAP1P78357 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP1P78357 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP1P78357 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms