Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.59□□□□□ -0.23
SNRPEP62304 KRT16P2-201ENST00000414673 1423 ntBASIC13.59□□□□□ -0.23
SNRPEP62304 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNRPEP62304 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.59□□□□□ -0.23
SNRPEP62304 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.59□□□□□ -0.23
SNRPEP62304 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SNRPEP62304 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.59□□□□□ -0.23
SNRPEP62304 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.59□□□□□ -0.23
SNRPEP62304 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.59□□□□□ -0.23
SNRPEP62304 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.59□□□□□ -0.23
SNRPEP62304 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.59□□□□□ -0.23
SNRPEP62304 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.59□□□□□ -0.23
SNRPEP62304 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
SNRPEP62304 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNRPEP62304 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SNRPEP62304 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNRPEP62304 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNRPEP62304 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNRPEP62304 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNRPEP62304 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SNRPEP62304 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
SNRPEP62304 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SNRPEP62304 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.58□□□□□ -0.24
SNRPEP62304 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 RPS2P35-201ENST00000443417 897 ntBASIC13.58□□□□□ -0.24
SNRPEP62304 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.58□□□□□ -0.24
SNRPEP62304 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.58□□□□□ -0.24
SNRPEP62304 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNRPEP62304 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.58□□□□□ -0.24
SNRPEP62304 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.58□□□□□ -0.24
SNRPEP62304 AC005089.1-201ENST00000619486 2241 ntBASIC13.58□□□□□ -0.24
SNRPEP62304 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SNRPEP62304 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.57□□□□□ -0.24
SNRPEP62304 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 AL117332.1-201ENST00000622628 974 ntBASIC13.57□□□□□ -0.24
SNRPEP62304 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNRPEP62304 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.57□□□□□ -0.24
SNRPEP62304 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SNRPEP62304 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms