Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SEC61A1P61619 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SEC61A1P61619 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SEC61A1P61619 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SEC61A1P61619 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.57■□□□□ 0.08
SEC61A1P61619 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
SEC61A1P61619 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SEC61A1P61619 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.57■□□□□ 0.08
SEC61A1P61619 AL357033.4-201ENST00000617703 1807 ntBASIC15.57■□□□□ 0.08
SEC61A1P61619 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SEC61A1P61619 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.57■□□□□ 0.08
SEC61A1P61619 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SEC61A1P61619 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 AL162727.3-201ENST00000635661 2787 ntBASIC15.56■□□□□ 0.08
SEC61A1P61619 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.56■□□□□ 0.08
SEC61A1P61619 HOMER2P1-201ENST00000455653 964 ntBASIC15.56■□□□□ 0.08
SEC61A1P61619 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.56■□□□□ 0.08
SEC61A1P61619 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.56■□□□□ 0.08
SEC61A1P61619 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.56■□□□□ 0.08
SEC61A1P61619 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SEC61A1P61619 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 AC024243.1-201ENST00000609234 778 ntBASIC15.56■□□□□ 0.08
SEC61A1P61619 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SEC61A1P61619 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.56■□□□□ 0.08
SEC61A1P61619 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SEC61A1P61619 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
SEC61A1P61619 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.56■□□□□ 0.08
SEC61A1P61619 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
SEC61A1P61619 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SEC61A1P61619 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SEC61A1P61619 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 CICP6-201ENST00000457191 2729 ntBASIC15.55■□□□□ 0.08
SEC61A1P61619 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
SEC61A1P61619 SPDYE15P-201ENST00000424157 909 ntBASIC15.55■□□□□ 0.08
SEC61A1P61619 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.55■□□□□ 0.08
SEC61A1P61619 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 PP12613-201ENST00000424958 2230 ntBASIC15.55■□□□□ 0.08
SEC61A1P61619 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SEC61A1P61619 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SEC61A1P61619 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SEC61A1P61619 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms