Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.98■□□□□ 0.31
VSX2P58304 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 AC007967.3-201ENST00000434308 558 ntBASIC16.98■□□□□ 0.31
VSX2P58304 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.98■□□□□ 0.31
VSX2P58304 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.98■□□□□ 0.31
VSX2P58304 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.98■□□□□ 0.31
VSX2P58304 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.98■□□□□ 0.31
VSX2P58304 RN7SL510P-201ENST00000581311 263 ntBASIC16.98■□□□□ 0.31
VSX2P58304 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.98■□□□□ 0.31
VSX2P58304 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.98■□□□□ 0.31
VSX2P58304 AC116407.2-201ENST00000613639 860 ntBASIC16.98■□□□□ 0.31
VSX2P58304 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VSX2P58304 AC097374.2-201ENST00000618617 1306 ntBASIC16.97■□□□□ 0.31
VSX2P58304 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.97■□□□□ 0.31
VSX2P58304 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
VSX2P58304 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VSX2P58304 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 AC096633.1-201ENST00000422446 749 ntBASIC16.97■□□□□ 0.31
VSX2P58304 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.97■□□□□ 0.31
VSX2P58304 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
VSX2P58304 AC011467.2-201ENST00000598425 242 ntBASIC16.97■□□□□ 0.31
VSX2P58304 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.97■□□□□ 0.31
VSX2P58304 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
VSX2P58304 AC010460.3-201ENST00000511359 1579 ntBASIC16.97■□□□□ 0.31
VSX2P58304 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.97■□□□□ 0.31
VSX2P58304 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VSX2P58304 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VSX2P58304 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 AC009949.1-201ENST00000623048 1830 ntBASIC16.96■□□□□ 0.31
VSX2P58304 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 AL390961.4-201ENST00000623958 2535 ntBASIC16.96■□□□□ 0.31
VSX2P58304 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 AC004870.1-201ENST00000315132 882 ntBASIC16.96■□□□□ 0.31
VSX2P58304 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.96■□□□□ 0.31
VSX2P58304 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
VSX2P58304 TPM4P1-201ENST00000436100 807 ntBASIC16.96■□□□□ 0.31
VSX2P58304 EMBP1-201ENST00000458200 901 ntBASIC16.96■□□□□ 0.31
VSX2P58304 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.96■□□□□ 0.31
VSX2P58304 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.96■□□□□ 0.31
VSX2P58304 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
VSX2P58304 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.96■□□□□ 0.31
VSX2P58304 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.96■□□□□ 0.31
VSX2P58304 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VSX2P58304 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.96■□□□□ 0.31
VSX2P58304 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.96■□□□□ 0.31
VSX2P58304 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.96■□□□□ 0.31
VSX2P58304 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms