Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 LIN28AP1-201ENST00000429574 405 ntBASIC15.32■□□□□ 0.04
SNU13P55769 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.32■□□□□ 0.04
SNU13P55769 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.32■□□□□ 0.04
SNU13P55769 MIR3917-201ENST00000580971 93 ntBASIC15.32■□□□□ 0.04
SNU13P55769 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.32■□□□□ 0.04
SNU13P55769 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNU13P55769 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNU13P55769 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.31■□□□□ 0.04
SNU13P55769 GCSHP2-201ENST00000560971 527 ntBASIC15.31■□□□□ 0.04
SNU13P55769 MIR3180-4-201ENST00000582223 153 ntBASIC15.31■□□□□ 0.04
SNU13P55769 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.31■□□□□ 0.04
SNU13P55769 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.31■□□□□ 0.04
SNU13P55769 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.31■□□□□ 0.04
SNU13P55769 AC141257.4-201ENST00000634557 245 ntBASIC15.31■□□□□ 0.04
SNU13P55769 AC136944.6-201ENST00000634818 245 ntBASIC15.31■□□□□ 0.04
SNU13P55769 AC133561.5-201ENST00000635547 218 ntBASIC15.31■□□□□ 0.04
SNU13P55769 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNU13P55769 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.31■□□□□ 0.04
SNU13P55769 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNU13P55769 AD000864.1-201ENST00000624076 2295 ntBASIC15.31■□□□□ 0.04
SNU13P55769 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNU13P55769 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNU13P55769 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
SNU13P55769 SLC25A3P1-201ENST00000443844 931 ntBASIC15.3■□□□□ 0.04
SNU13P55769 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.3■□□□□ 0.04
SNU13P55769 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 AC100803.2-201ENST00000562459 1963 ntBASIC15.3■□□□□ 0.04
SNU13P55769 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNU13P55769 NEK4P2-201ENST00000580004 1012 ntBASIC15.3■□□□□ 0.04
SNU13P55769 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SNU13P55769 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SNU13P55769 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SNU13P55769 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.3■□□□□ 0.04
SNU13P55769 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNU13P55769 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms