Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PMS1P54277 AC005104.2-201ENST00000427818 678 ntBASIC19.5■□□□□ 0.71
PMS1P54277 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.5■□□□□ 0.71
PMS1P54277 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.5■□□□□ 0.71
PMS1P54277 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.5■□□□□ 0.71
PMS1P54277 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.5■□□□□ 0.71
PMS1P54277 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PMS1P54277 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.5■□□□□ 0.71
PMS1P54277 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS1P54277 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS1P54277 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 AC096633.1-201ENST00000422446 749 ntBASIC19.49■□□□□ 0.71
PMS1P54277 TMPOP1-202ENST00000424642 1267 ntBASIC19.49■□□□□ 0.71
PMS1P54277 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS1P54277 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.49■□□□□ 0.71
PMS1P54277 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PMS1P54277 BX276092.7-203ENST00000637198 1536 ntBASIC19.49■□□□□ 0.71
PMS1P54277 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PMS1P54277 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS1P54277 PRORSD1P-202ENST00000563365 2154 ntBASIC19.49■□□□□ 0.71
PMS1P54277 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PMS1P54277 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PMS1P54277 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.48■□□□□ 0.71
PMS1P54277 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
PMS1P54277 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.48■□□□□ 0.71
PMS1P54277 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 AL645929.1-201ENST00000420084 975 ntBASIC19.48■□□□□ 0.71
PMS1P54277 AL845331.1-201ENST00000424978 1190 ntBASIC19.48■□□□□ 0.71
PMS1P54277 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PMS1P54277 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.48■□□□□ 0.71
PMS1P54277 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS1P54277 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.47■□□□□ 0.71
PMS1P54277 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.47■□□□□ 0.71
PMS1P54277 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 RN7SL606P-201ENST00000472779 293 ntBASIC19.47■□□□□ 0.71
PMS1P54277 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.47■□□□□ 0.71
PMS1P54277 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS1P54277 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS1P54277 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.47■□□□□ 0.71
PMS1P54277 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS1P54277 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS1P54277 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS1P54277 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS1P54277 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms