Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
ITGA8P53708 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.21■□□□□ 0.51
ITGA8P53708 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ITGA8P53708 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITGA8P53708 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ITGA8P53708 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.21■□□□□ 0.51
ITGA8P53708 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITGA8P53708 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.21■□□□□ 0.51
ITGA8P53708 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITGA8P53708 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ITGA8P53708 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.2■□□□□ 0.5
ITGA8P53708 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.2■□□□□ 0.5
ITGA8P53708 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.2■□□□□ 0.5
ITGA8P53708 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 FAM87A-204ENST00000613235 858 ntBASIC18.2■□□□□ 0.5
ITGA8P53708 AC010947.1-201ENST00000623454 693 ntBASIC18.2■□□□□ 0.5
ITGA8P53708 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ITGA8P53708 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.2■□□□□ 0.5
ITGA8P53708 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ITGA8P53708 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.2■□□□□ 0.5
ITGA8P53708 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITGA8P53708 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
ITGA8P53708 AL118508.1-201ENST00000613502 2345 ntBASIC18.2■□□□□ 0.5
ITGA8P53708 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.19■□□□□ 0.5
ITGA8P53708 AC106886.4-201ENST00000623557 2502 ntBASIC18.19■□□□□ 0.5
ITGA8P53708 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 KRT18P65-201ENST00000439811 1286 ntBASIC18.19■□□□□ 0.5
ITGA8P53708 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.19■□□□□ 0.5
ITGA8P53708 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.19■□□□□ 0.5
ITGA8P53708 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ITGA8P53708 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.19■□□□□ 0.5
ITGA8P53708 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ITGA8P53708 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ITGA8P53708 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ITGA8P53708 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITGA8P53708 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.19■□□□□ 0.5
ITGA8P53708 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.19■□□□□ 0.5
ITGA8P53708 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ITGA8P53708 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ITGA8P53708 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.18■□□□□ 0.5
ITGA8P53708 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 ECEL1P2-202ENST00000465689 757 ntBASIC18.18■□□□□ 0.5
ITGA8P53708 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.18■□□□□ 0.5
ITGA8P53708 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 AL512604.3-201ENST00000569583 964 ntBASIC18.18■□□□□ 0.5
ITGA8P53708 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.18■□□□□ 0.5
ITGA8P53708 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.18■□□□□ 0.5
ITGA8P53708 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
ITGA8P53708 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms