Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.64■□□□□ 0.25
SMSP52788 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.64■□□□□ 0.25
SMSP52788 AL136038.4-201ENST00000603606 1261 ntBASIC16.64■□□□□ 0.25
SMSP52788 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SMSP52788 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.64■□□□□ 0.25
SMSP52788 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMSP52788 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
SMSP52788 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SMSP52788 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 TSPY22P-201ENST00000427496 604 ntBASIC16.63■□□□□ 0.25
SMSP52788 AP002383.4-201ENST00000442518 975 ntBASIC16.63■□□□□ 0.25
SMSP52788 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.63■□□□□ 0.25
SMSP52788 AC091304.2-201ENST00000564639 760 ntBASIC16.63■□□□□ 0.25
SMSP52788 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMSP52788 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.63■□□□□ 0.25
SMSP52788 IFNL4P1-201ENST00000607083 540 ntBASIC16.63■□□□□ 0.25
SMSP52788 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.63■□□□□ 0.25
SMSP52788 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMSP52788 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SMSP52788 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMSP52788 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SMSP52788 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.63■□□□□ 0.25
SMSP52788 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.63■□□□□ 0.25
SMSP52788 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.62■□□□□ 0.25
SMSP52788 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
SMSP52788 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.62■□□□□ 0.25
SMSP52788 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.62■□□□□ 0.25
SMSP52788 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.62■□□□□ 0.25
SMSP52788 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.62■□□□□ 0.25
SMSP52788 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.62■□□□□ 0.25
SMSP52788 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.62■□□□□ 0.25
SMSP52788 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMSP52788 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.62■□□□□ 0.25
SMSP52788 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.62■□□□□ 0.25
SMSP52788 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SMSP52788 KRT8P50-201ENST00000562022 1438 ntBASIC16.62■□□□□ 0.25
SMSP52788 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMSP52788 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms