Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCN3P51790 KLF4P1-201ENST00000412782 1185 ntBASIC19.43■□□□□ 0.7
CLCN3P51790 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 AL020989.1-201ENST00000422979 469 ntBASIC19.43■□□□□ 0.7
CLCN3P51790 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCN3P51790 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 POLD2P1-201ENST00000511220 997 ntBASIC19.43■□□□□ 0.7
CLCN3P51790 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCN3P51790 AC105339.3-201ENST00000560043 636 ntBASIC19.43■□□□□ 0.7
CLCN3P51790 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCN3P51790 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 AC023511.2-201ENST00000618803 211 ntBASIC19.43■□□□□ 0.7
CLCN3P51790 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN3P51790 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CLCN3P51790 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN3P51790 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN3P51790 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 AC104109.2-201ENST00000602919 1418 ntBASIC19.42■□□□□ 0.7
CLCN3P51790 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 MIR940-201ENST00000401276 94 ntBASIC19.42■□□□□ 0.7
CLCN3P51790 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCN3P51790 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN3P51790 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLCN3P51790 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN3P51790 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN3P51790 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN3P51790 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN3P51790 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CLCN3P51790 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLCN3P51790 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.41■□□□□ 0.7
CLCN3P51790 PRYP5-201ENST00000451909 266 ntBASIC19.41■□□□□ 0.7
CLCN3P51790 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.41■□□□□ 0.7
CLCN3P51790 RNA5SP415-201ENST00000517246 115 ntBASIC19.41■□□□□ 0.7
CLCN3P51790 KRT18P58-201ENST00000527480 1120 ntBASIC19.41■□□□□ 0.7
CLCN3P51790 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.41■□□□□ 0.7
CLCN3P51790 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN3P51790 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms