Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SRP9P49458 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SRP9P49458 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SRP9P49458 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP9P49458 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 AC073508.3-201ENST00000619697 1419 ntBASIC15.77■□□□□ 0.12
SRP9P49458 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
SRP9P49458 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SRP9P49458 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.77■□□□□ 0.12
SRP9P49458 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.77■□□□□ 0.12
SRP9P49458 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.77■□□□□ 0.12
SRP9P49458 KRT18P41-201ENST00000518924 1277 ntBASIC15.77■□□□□ 0.12
SRP9P49458 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SRP9P49458 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.77■□□□□ 0.12
SRP9P49458 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.77■□□□□ 0.12
SRP9P49458 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.77■□□□□ 0.12
SRP9P49458 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.77■□□□□ 0.12
SRP9P49458 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SRP9P49458 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SRP9P49458 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SRP9P49458 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SRP9P49458 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SRP9P49458 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SRP9P49458 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SRP9P49458 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SRP9P49458 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SRP9P49458 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SRP9P49458 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SRP9P49458 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.76■□□□□ 0.11
SRP9P49458 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SRP9P49458 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.76■□□□□ 0.11
SRP9P49458 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 TMPOP1-202ENST00000424642 1267 ntBASIC15.76■□□□□ 0.11
SRP9P49458 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.76■□□□□ 0.11
SRP9P49458 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.76■□□□□ 0.11
SRP9P49458 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
SRP9P49458 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SRP9P49458 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SRP9P49458 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SRP9P49458 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SRP9P49458 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
SRP9P49458 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SRP9P49458 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms