Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC005521.1-201ENST00000393351 872 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 AC117947.1-201ENST00000427448 529 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 HLA-F-220ENST00000434407 884 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 KRT18P57-201ENST00000443599 1254 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.61■□□□□ 0.09
CX3CR1P49238 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.61■□□□□ 0.09
CX3CR1P49238 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CX3CR1P49238 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.61■□□□□ 0.09
CX3CR1P49238 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CR1P49238 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.61■□□□□ 0.09
CX3CR1P49238 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.61■□□□□ 0.09
CX3CR1P49238 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
CX3CR1P49238 AC004263.2-201ENST00000617183 678 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CX3CR1P49238 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.61■□□□□ 0.09
CX3CR1P49238 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 AC009949.1-201ENST00000623048 1830 ntBASIC15.61■□□□□ 0.09
CX3CR1P49238 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CR1P49238 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CX3CR1P49238 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.6■□□□□ 0.09
CX3CR1P49238 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC092597.1-201ENST00000487352 616 ntBASIC15.6■□□□□ 0.09
CX3CR1P49238 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.6■□□□□ 0.09
CX3CR1P49238 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.6■□□□□ 0.09
CX3CR1P49238 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CX3CR1P49238 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CR1P49238 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC133963.1-201ENST00000504166 1679 ntBASIC15.6■□□□□ 0.09
CX3CR1P49238 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CX3CR1P49238 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC073508.3-201ENST00000619697 1419 ntBASIC15.6■□□□□ 0.09
CX3CR1P49238 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CX3CR1P49238 AC141586.5-201ENST00000624546 2050 ntBASIC15.59■□□□□ 0.09
CX3CR1P49238 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 TSPY12P-201ENST00000421279 868 ntBASIC15.59■□□□□ 0.09
CX3CR1P49238 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.59■□□□□ 0.09
CX3CR1P49238 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.59■□□□□ 0.09
CX3CR1P49238 ZNF444P1-201ENST00000559497 298 ntBASIC15.59■□□□□ 0.09
CX3CR1P49238 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.59■□□□□ 0.09
CX3CR1P49238 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms