Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR3AP46098 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR3AP46098 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR3AP46098 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HTR3AP46098 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HTR3AP46098 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.41■□□□□ 0.22
HTR3AP46098 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR3AP46098 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR3AP46098 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.4■□□□□ 0.22
HTR3AP46098 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
HTR3AP46098 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 KRT18P38-201ENST00000449496 1282 ntBASIC16.4■□□□□ 0.22
HTR3AP46098 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.4■□□□□ 0.22
HTR3AP46098 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 AL356309.3-201ENST00000624132 1934 ntBASIC16.4■□□□□ 0.22
HTR3AP46098 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HTR3AP46098 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 AC022211.2-201ENST00000585075 2527 ntBASIC16.4■□□□□ 0.22
HTR3AP46098 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HTR3AP46098 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR3AP46098 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
HTR3AP46098 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HTR3AP46098 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HTR3AP46098 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 LINC00167-201ENST00000530583 1419 ntBASIC16.39■□□□□ 0.21
HTR3AP46098 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.39■□□□□ 0.21
HTR3AP46098 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.39■□□□□ 0.21
HTR3AP46098 KRT18P65-201ENST00000439811 1286 ntBASIC16.39■□□□□ 0.21
HTR3AP46098 AP003733.1-201ENST00000491725 852 ntBASIC16.39■□□□□ 0.21
HTR3AP46098 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.39■□□□□ 0.21
HTR3AP46098 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.39■□□□□ 0.21
HTR3AP46098 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.39■□□□□ 0.21
HTR3AP46098 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
HTR3AP46098 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HTR3AP46098 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.39■□□□□ 0.21
HTR3AP46098 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HTR3AP46098 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HTR3AP46098 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms