Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC097637.2-201ENST00000624096 1997 ntBASIC19.75■□□□□ 0.75
HTTP42858 PTCHD3P3-201ENST00000403073 906 ntBASIC19.75■□□□□ 0.75
HTTP42858 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.75■□□□□ 0.75
HTTP42858 HILS1-202ENST00000545329 423 ntBASIC19.75■□□□□ 0.75
HTTP42858 AC116407.2-201ENST00000613639 860 ntBASIC19.75■□□□□ 0.75
HTTP42858 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTTP42858 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
HTTP42858 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTTP42858 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTTP42858 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HTTP42858 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.75■□□□□ 0.75
HTTP42858 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.75■□□□□ 0.75
HTTP42858 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.75■□□□□ 0.75
HTTP42858 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.75■□□□□ 0.75
HTTP42858 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTTP42858 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
HTTP42858 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HTTP42858 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
HTTP42858 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.74■□□□□ 0.75
HTTP42858 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.74■□□□□ 0.75
HTTP42858 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.74■□□□□ 0.75
HTTP42858 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HTTP42858 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.74■□□□□ 0.75
HTTP42858 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.74■□□□□ 0.75
HTTP42858 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.74■□□□□ 0.75
HTTP42858 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 FAM185BP-201ENST00000443595 716 ntBASIC19.74■□□□□ 0.75
HTTP42858 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.74■□□□□ 0.75
HTTP42858 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.74■□□□□ 0.75
HTTP42858 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.74■□□□□ 0.75
HTTP42858 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTTP42858 AC092580.3-201ENST00000430932 139 ntBASIC19.74■□□□□ 0.75
HTTP42858 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.74■□□□□ 0.75
HTTP42858 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.74■□□□□ 0.75
HTTP42858 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.73■□□□□ 0.75
HTTP42858 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.73■□□□□ 0.75
HTTP42858 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.73■□□□□ 0.75
HTTP42858 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.73■□□□□ 0.75
HTTP42858 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.73■□□□□ 0.75
HTTP42858 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.73■□□□□ 0.75
HTTP42858 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTTP42858 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.73■□□□□ 0.75
HTTP42858 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HTTP42858 SPTLC1P1-201ENST00000447199 261 ntBASIC19.72■□□□□ 0.75
HTTP42858 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 AC243562.1-201ENST00000560672 389 ntBASIC19.72■□□□□ 0.75
HTTP42858 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.72■□□□□ 0.75
HTTP42858 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HTTP42858 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HTTP42858 PHGDH-209ENST00000641074 1780 ntBASIC19.71■□□□□ 0.75
HTTP42858 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.71■□□□□ 0.75
HTTP42858 AL662799.1-202ENST00000614205 422 ntBASIC19.71■□□□□ 0.75
HTTP42858 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
HTTP42858 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HTTP42858 AC079776.1-201ENST00000401540 1152 ntBASIC19.71■□□□□ 0.75
HTTP42858 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.71■□□□□ 0.75
HTTP42858 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.71■□□□□ 0.75
HTTP42858 AC004890.2-204ENST00000481968 304 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms