Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCNFP41002 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 AC022898.2-201ENST00000616822 1312 ntBASIC17.86■□□□□ 0.45
CCNFP41002 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.86■□□□□ 0.45
CCNFP41002 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNFP41002 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 AC011676.5-201ENST00000624864 2660 ntBASIC17.85■□□□□ 0.45
CCNFP41002 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCNFP41002 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCNFP41002 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.85■□□□□ 0.45
CCNFP41002 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CCNFP41002 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.85■□□□□ 0.45
CCNFP41002 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.85■□□□□ 0.45
CCNFP41002 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.85■□□□□ 0.45
CCNFP41002 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.85■□□□□ 0.45
CCNFP41002 AC022616.7-201ENST00000525383 220 ntBASIC17.85■□□□□ 0.45
CCNFP41002 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.85■□□□□ 0.45
CCNFP41002 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.85■□□□□ 0.45
CCNFP41002 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.85■□□□□ 0.45
CCNFP41002 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.85■□□□□ 0.45
CCNFP41002 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 AC018695.7-201ENST00000624587 2492 ntBASIC17.85■□□□□ 0.45
CCNFP41002 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCNFP41002 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNFP41002 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.84■□□□□ 0.45
CCNFP41002 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
CCNFP41002 SPDYE15P-201ENST00000424157 909 ntBASIC17.84■□□□□ 0.45
CCNFP41002 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCNFP41002 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.84■□□□□ 0.45
CCNFP41002 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCNFP41002 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CCNFP41002 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCNFP41002 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCNFP41002 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCNFP41002 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCNFP41002 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
CCNFP41002 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCNFP41002 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCNFP41002 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.83■□□□□ 0.45
CCNFP41002 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CCNFP41002 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 REXO1L11P-201ENST00000620964 1927 ntBASIC17.83■□□□□ 0.44
CCNFP41002 AL359075.1-203ENST00000462729 1002 ntBASIC17.83■□□□□ 0.44
CCNFP41002 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
CCNFP41002 AL136038.4-201ENST00000603606 1261 ntBASIC17.83■□□□□ 0.44
CCNFP41002 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCNFP41002 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms