Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.96■□□□□ 0.47
HADHAP40939 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HADHAP40939 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.96■□□□□ 0.47
HADHAP40939 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.96■□□□□ 0.47
HADHAP40939 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.96■□□□□ 0.47
HADHAP40939 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.96■□□□□ 0.47
HADHAP40939 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
HADHAP40939 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 RNF126P1-202ENST00000569893 925 ntBASIC17.96■□□□□ 0.47
HADHAP40939 AC087388.1-201ENST00000571370 1112 ntBASIC17.96■□□□□ 0.47
HADHAP40939 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.96■□□□□ 0.47
HADHAP40939 AC116407.2-201ENST00000613639 860 ntBASIC17.96■□□□□ 0.47
HADHAP40939 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HADHAP40939 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.96■□□□□ 0.47
HADHAP40939 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.96■□□□□ 0.47
HADHAP40939 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HADHAP40939 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HADHAP40939 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HADHAP40939 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HADHAP40939 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
HADHAP40939 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.95■□□□□ 0.46
HADHAP40939 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
HADHAP40939 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HADHAP40939 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.95■□□□□ 0.46
HADHAP40939 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.95■□□□□ 0.46
HADHAP40939 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.95■□□□□ 0.46
HADHAP40939 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.95■□□□□ 0.46
HADHAP40939 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.95■□□□□ 0.46
HADHAP40939 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.95■□□□□ 0.46
HADHAP40939 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 AL645608.8-201ENST00000606034 2086 ntBASIC17.95■□□□□ 0.46
HADHAP40939 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HADHAP40939 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.95■□□□□ 0.46
HADHAP40939 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 AC133963.1-201ENST00000504166 1679 ntBASIC17.94■□□□□ 0.46
HADHAP40939 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.94■□□□□ 0.46
HADHAP40939 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.94■□□□□ 0.46
HADHAP40939 AC011498.5-201ENST00000592027 486 ntBASIC17.94■□□□□ 0.46
HADHAP40939 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 AL138688.1-201ENST00000624851 1594 ntBASIC17.94■□□□□ 0.46
HADHAP40939 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
HADHAP40939 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.94■□□□□ 0.46
HADHAP40939 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
HADHAP40939 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HADHAP40939 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms