Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.35■■□□□ 1.17
COL15A1P39059 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.35■■□□□ 1.17
COL15A1P39059 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL15A1P39059 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL15A1P39059 BICD1-207ENST00000551848 1962 ntBASIC22.35■■□□□ 1.17
COL15A1P39059 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL15A1P39059 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL15A1P39059 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL15A1P39059 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 AC104581.1-202ENST00000635932 2618 ntBASIC22.34■■□□□ 1.17
COL15A1P39059 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 ELL2P1-201ENST00000413990 1906 ntBASIC22.34■■□□□ 1.17
COL15A1P39059 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.34■■□□□ 1.17
COL15A1P39059 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 CNN2P11-201ENST00000429351 262 ntBASIC22.34■■□□□ 1.17
COL15A1P39059 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.34■■□□□ 1.17
COL15A1P39059 SIGLEC30P-201ENST00000455569 941 ntBASIC22.34■■□□□ 1.17
COL15A1P39059 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.34■■□□□ 1.17
COL15A1P39059 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
COL15A1P39059 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL15A1P39059 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.34■■□□□ 1.17
COL15A1P39059 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
COL15A1P39059 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
COL15A1P39059 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.33■■□□□ 1.17
COL15A1P39059 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.33■■□□□ 1.17
COL15A1P39059 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL15A1P39059 PDPK2P-202ENST00000562415 1191 ntBASIC22.33■■□□□ 1.17
COL15A1P39059 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.33■■□□□ 1.17
COL15A1P39059 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL15A1P39059 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.16
COL15A1P39059 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL15A1P39059 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL15A1P39059 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL15A1P39059 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL15A1P39059 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.32■■□□□ 1.16
COL15A1P39059 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.32■■□□□ 1.16
COL15A1P39059 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COL15A1P39059 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
COL15A1P39059 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.32■■□□□ 1.16
COL15A1P39059 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL15A1P39059 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.32■■□□□ 1.16
COL15A1P39059 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.32■■□□□ 1.16
COL15A1P39059 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.32■■□□□ 1.16
COL15A1P39059 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.32■■□□□ 1.16
COL15A1P39059 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.32■■□□□ 1.16
COL15A1P39059 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.32■■□□□ 1.16
COL15A1P39059 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL15A1P39059 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL15A1P39059 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL15A1P39059 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.31■■□□□ 1.16
COL15A1P39059 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.31■■□□□ 1.16
COL15A1P39059 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.31■■□□□ 1.16
COL15A1P39059 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL15A1P39059 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.31■■□□□ 1.16
COL15A1P39059 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.31■■□□□ 1.16
COL15A1P39059 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.31■■□□□ 1.16
COL15A1P39059 AC027612.4-201ENST00000605371 583 ntBASIC22.31■■□□□ 1.16
COL15A1P39059 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.31■■□□□ 1.16
COL15A1P39059 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.31■■□□□ 1.16
COL15A1P39059 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.31■■□□□ 1.16
COL15A1P39059 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL15A1P39059 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.31■■□□□ 1.16
COL15A1P39059 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms