Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN1AP38936 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN1AP38936 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN1AP38936 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDKN1AP38936 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN1AP38936 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN1AP38936 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CDKN1AP38936 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN1AP38936 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CDKN1AP38936 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.11■□□□□ 0.01
CDKN1AP38936 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 BX005266.1-201ENST00000473402 457 ntBASIC15.11■□□□□ 0.01
CDKN1AP38936 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN1AP38936 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN1AP38936 AC145285.3-201ENST00000564603 959 ntBASIC15.11■□□□□ 0.01
CDKN1AP38936 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.11■□□□□ 0.01
CDKN1AP38936 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CDKN1AP38936 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN1AP38936 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKN1AP38936 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN1AP38936 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN1AP38936 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN1AP38936 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDKN1AP38936 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDKN1AP38936 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 AP002414.3-201ENST00000589352 1468 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKN1AP38936 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 RNA5SP415-201ENST00000517246 115 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CDKN1AP38936 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKN1AP38936 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKN1AP38936 AC034105.1-201ENST00000563488 319 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 AL356488.2-201ENST00000602755 427 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 AC027601.4-201ENST00000611259 610 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 AC008735.5-201ENST00000623544 497 ntBASIC15.1■□□□□ 0.01
CDKN1AP38936 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN1AP38936 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDKN1AP38936 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms