Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RFC4P35249 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.14■■□□□ 1.13
RFC4P35249 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 CXCL1P1-201ENST00000502804 216 ntBASIC22.14■■□□□ 1.13
RFC4P35249 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.14■■□□□ 1.13
RFC4P35249 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RFC4P35249 AC068137.2-201ENST00000605408 478 ntBASIC22.14■■□□□ 1.13
RFC4P35249 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.14■■□□□ 1.13
RFC4P35249 REXO1L3P-201ENST00000622202 1288 ntBASIC22.14■■□□□ 1.13
RFC4P35249 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC4P35249 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RFC4P35249 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
RFC4P35249 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 AC009336.1-201ENST00000608941 1553 ntBASIC22.13■■□□□ 1.13
RFC4P35249 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.13■■□□□ 1.13
RFC4P35249 AC109322.1-201ENST00000524499 1264 ntBASIC22.13■■□□□ 1.13
RFC4P35249 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.13■■□□□ 1.13
RFC4P35249 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFC4P35249 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.13■■□□□ 1.13
RFC4P35249 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RFC4P35249 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
RFC4P35249 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.12■■□□□ 1.13
RFC4P35249 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
RFC4P35249 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.12■■□□□ 1.13
RFC4P35249 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.12■■□□□ 1.13
RFC4P35249 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.12■■□□□ 1.13
RFC4P35249 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RFC4P35249 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.12■■□□□ 1.13
RFC4P35249 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.12■■□□□ 1.13
RFC4P35249 AC005498.2-205ENST00000593218 784 ntBASIC22.12■■□□□ 1.13
RFC4P35249 AC022145.2-201ENST00000598203 171 ntBASIC22.12■■□□□ 1.13
RFC4P35249 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.12■■□□□ 1.13
RFC4P35249 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RFC4P35249 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.12■■□□□ 1.13
RFC4P35249 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.12■■□□□ 1.13
RFC4P35249 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 AL121761.2-201ENST00000598007 1648 ntBASIC22.12■■□□□ 1.13
RFC4P35249 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFC4P35249 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
RFC4P35249 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RFC4P35249 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RFC4P35249 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RFC4P35249 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.11■■□□□ 1.13
RFC4P35249 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.11■■□□□ 1.13
RFC4P35249 PAWRP1-201ENST00000451083 565 ntBASIC22.11■■□□□ 1.13
RFC4P35249 AC023141.5-201ENST00000458585 616 ntBASIC22.11■■□□□ 1.13
RFC4P35249 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.11■■□□□ 1.13
RFC4P35249 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.11■■□□□ 1.13
RFC4P35249 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.11■■□□□ 1.13
RFC4P35249 AC116407.2-201ENST00000613639 860 ntBASIC22.11■■□□□ 1.13
RFC4P35249 LINC00628-201ENST00000628516 1289 ntBASIC22.11■■□□□ 1.13
RFC4P35249 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.11■■□□□ 1.13
RFC4P35249 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RFC4P35249 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.11■■□□□ 1.13
RFC4P35249 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFC4P35249 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.11■■□□□ 1.13
RFC4P35249 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFC4P35249 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFC4P35249 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
RFC4P35249 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFC4P35249 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFC4P35249 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFC4P35249 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms