Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.07■□□□□ 0.16
GDF1P27539 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.07■□□□□ 0.16
GDF1P27539 SCARNA2-201ENST00000458748 420 ntBASIC16.07■□□□□ 0.16
GDF1P27539 AC122714.2-201ENST00000502787 707 ntBASIC16.07■□□□□ 0.16
GDF1P27539 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.07■□□□□ 0.16
GDF1P27539 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 AL662844.1-201ENST00000546340 181 ntBASIC16.07■□□□□ 0.16
GDF1P27539 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.07■□□□□ 0.16
GDF1P27539 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.07■□□□□ 0.16
GDF1P27539 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 AP005117.1-201ENST00000584346 1413 ntBASIC16.07■□□□□ 0.16
GDF1P27539 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.07■□□□□ 0.16
GDF1P27539 AC009949.1-201ENST00000623048 1830 ntBASIC16.07■□□□□ 0.16
GDF1P27539 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GDF1P27539 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.07■□□□□ 0.16
GDF1P27539 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDF1P27539 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 AC138028.4-201ENST00000564984 1845 ntBASIC16.06■□□□□ 0.16
GDF1P27539 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.06■□□□□ 0.16
GDF1P27539 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GDF1P27539 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.06■□□□□ 0.16
GDF1P27539 FGFR3P6-201ENST00000457012 610 ntBASIC16.06■□□□□ 0.16
GDF1P27539 AF186996.4-201ENST00000467186 377 ntBASIC16.06■□□□□ 0.16
GDF1P27539 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 AC073648.2-201ENST00000510116 352 ntBASIC16.06■□□□□ 0.16
GDF1P27539 AC079776.4-201ENST00000511039 504 ntBASIC16.06■□□□□ 0.16
GDF1P27539 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.06■□□□□ 0.16
GDF1P27539 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.06■□□□□ 0.16
GDF1P27539 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
GDF1P27539 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDF1P27539 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GDF1P27539 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.05■□□□□ 0.16
GDF1P27539 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GDF1P27539 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
GDF1P27539 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms