Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD27P26842 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD27P26842 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD27P26842 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
CD27P26842 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CD27P26842 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 MYCLP1-201ENST00000372451 1075 ntBASIC17.3■□□□□ 0.36
CD27P26842 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD27P26842 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.3■□□□□ 0.36
CD27P26842 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.3■□□□□ 0.36
CD27P26842 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.3■□□□□ 0.36
CD27P26842 AC027796.2-201ENST00000575326 344 ntBASIC17.3■□□□□ 0.36
CD27P26842 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.3■□□□□ 0.36
CD27P26842 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.3■□□□□ 0.36
CD27P26842 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.3■□□□□ 0.36
CD27P26842 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CD27P26842 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD27P26842 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.3■□□□□ 0.36
CD27P26842 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
CD27P26842 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 AP002414.1-201ENST00000391405 1147 ntBASIC17.29■□□□□ 0.36
CD27P26842 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.29■□□□□ 0.36
CD27P26842 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.29■□□□□ 0.36
CD27P26842 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.29■□□□□ 0.36
CD27P26842 MIR4469-201ENST00000583919 79 ntBASIC17.29■□□□□ 0.36
CD27P26842 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 AL353135.1-201ENST00000606729 504 ntBASIC17.29■□□□□ 0.36
CD27P26842 AL596442.2-201ENST00000610240 980 ntBASIC17.29■□□□□ 0.36
CD27P26842 GGTLC5P-201ENST00000617623 998 ntBASIC17.29■□□□□ 0.36
CD27P26842 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CD27P26842 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.29■□□□□ 0.36
CD27P26842 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD27P26842 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD27P26842 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
CD27P26842 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.28■□□□□ 0.36
CD27P26842 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CD27P26842 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 PTCHD3P3-201ENST00000403073 906 ntBASIC17.28■□□□□ 0.36
CD27P26842 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
CD27P26842 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.28■□□□□ 0.36
CD27P26842 ALG1L5P-201ENST00000482043 771 ntBASIC17.28■□□□□ 0.36
CD27P26842 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.28■□□□□ 0.36
CD27P26842 SNHG9-202ENST00000564014 471 ntBASIC17.28■□□□□ 0.36
CD27P26842 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.28■□□□□ 0.36
CD27P26842 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 AL355385.1-201ENST00000606123 409 ntBASIC17.28■□□□□ 0.36
CD27P26842 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.28■□□□□ 0.36
CD27P26842 AL513190.1-201ENST00000621254 727 ntBASIC17.28■□□□□ 0.36
CD27P26842 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD27P26842 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD27P26842 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms