Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VARSP26640 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
VARSP26640 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 LINC00602-201ENST00000629776 2065 ntBASIC17.46■□□□□ 0.39
VARSP26640 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.46■□□□□ 0.39
VARSP26640 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.46■□□□□ 0.39
VARSP26640 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.46■□□□□ 0.39
VARSP26640 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.46■□□□□ 0.39
VARSP26640 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.46■□□□□ 0.39
VARSP26640 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.46■□□□□ 0.39
VARSP26640 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.46■□□□□ 0.39
VARSP26640 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.46■□□□□ 0.39
VARSP26640 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.46■□□□□ 0.39
VARSP26640 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.46■□□□□ 0.39
VARSP26640 ZNF444P1-201ENST00000559497 298 ntBASIC17.46■□□□□ 0.39
VARSP26640 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.46■□□□□ 0.39
VARSP26640 CLEC4GP1-201ENST00000596555 870 ntBASIC17.46■□□□□ 0.39
VARSP26640 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.46■□□□□ 0.39
VARSP26640 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.46■□□□□ 0.39
VARSP26640 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VARSP26640 HYMAI.1-201ENST00000620949 238 ntBASIC17.46■□□□□ 0.39
VARSP26640 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VARSP26640 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.46■□□□□ 0.39
VARSP26640 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARSP26640 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.46■□□□□ 0.39
VARSP26640 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VARSP26640 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
VARSP26640 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
VARSP26640 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
VARSP26640 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
VARSP26640 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 CICP6-201ENST00000457191 2729 ntBASIC17.45■□□□□ 0.38
VARSP26640 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VARSP26640 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
VARSP26640 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 HBZP1-201ENST00000354915 429 ntBASIC17.45■□□□□ 0.38
VARSP26640 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.45■□□□□ 0.38
VARSP26640 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.45■□□□□ 0.38
VARSP26640 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.45■□□□□ 0.38
VARSP26640 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.45■□□□□ 0.38
VARSP26640 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.45■□□□□ 0.38
VARSP26640 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.45■□□□□ 0.38
VARSP26640 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 LINC00167-201ENST00000530583 1419 ntBASIC17.45■□□□□ 0.38
VARSP26640 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.45■□□□□ 0.38
VARSP26640 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARSP26640 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VARSP26640 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
VARSP26640 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
VARSP26640 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms