Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PTPN3P26045 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTPN3P26045 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTPN3P26045 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN3P26045 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 BX276092.5-203ENST00000456199 560 ntBASIC18.08■□□□□ 0.48
PTPN3P26045 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 AL121672.3-201ENST00000608644 468 ntBASIC18.08■□□□□ 0.48
PTPN3P26045 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTPN3P26045 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN3P26045 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.08■□□□□ 0.48
PTPN3P26045 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN3P26045 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 AC005104.2-201ENST00000427818 678 ntBASIC18.07■□□□□ 0.48
PTPN3P26045 CHCHD2P8-201ENST00000429873 447 ntBASIC18.07■□□□□ 0.48
PTPN3P26045 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 AC005336.2-201ENST00000593183 939 ntBASIC18.07■□□□□ 0.48
PTPN3P26045 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN3P26045 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN3P26045 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.07■□□□□ 0.48
PTPN3P26045 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN3P26045 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN3P26045 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN3P26045 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN3P26045 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN3P26045 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN3P26045 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN3P26045 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN3P26045 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms