Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 STK19B-204ENST00000512515 211 ntBASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 AC011467.4-201ENST00000594891 528 ntBASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSB-PGBD3P0DP91 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 AC025580.3-201ENST00000617932 1424 ntBASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CSB-PGBD3P0DP91 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 TSEN15P1-201ENST00000423257 515 ntBASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 AL031598.1-201ENST00000561511 1773 ntBASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSB-PGBD3P0DP91 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
CSB-PGBD3P0DP91 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 AC074386.1-202ENST00000463561 864 ntBASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 STK25P1-201ENST00000585406 838 ntBASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 GGTLC5P-201ENST00000617623 998 ntBASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 HCG11-201ENST00000411553 5696 ntBASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CSB-PGBD3P0DP91 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms