Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 AC125634.1-201ENST00000438758 1403 ntBASIC16.09■□□□□ 0.17
FREM3P0C091 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 TP73-AS1-210ENST00000637775 1455 ntBASIC16.09■□□□□ 0.17
FREM3P0C091 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.09■□□□□ 0.17
FREM3P0C091 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.09■□□□□ 0.17
FREM3P0C091 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.09■□□□□ 0.17
FREM3P0C091 KRT18P67-201ENST00000432816 1264 ntBASIC16.09■□□□□ 0.17
FREM3P0C091 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.09■□□□□ 0.17
FREM3P0C091 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
FREM3P0C091 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FREM3P0C091 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FREM3P0C091 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.09■□□□□ 0.17
FREM3P0C091 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.08■□□□□ 0.17
FREM3P0C091 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.08■□□□□ 0.17
FREM3P0C091 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.08■□□□□ 0.17
FREM3P0C091 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.08■□□□□ 0.17
FREM3P0C091 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
FREM3P0C091 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
FREM3P0C091 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.08■□□□□ 0.17
FREM3P0C091 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FREM3P0C091 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.08■□□□□ 0.16
FREM3P0C091 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.08■□□□□ 0.16
FREM3P0C091 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
FREM3P0C091 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.08■□□□□ 0.16
FREM3P0C091 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.08■□□□□ 0.16
FREM3P0C091 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FREM3P0C091 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 FLJ13224-201ENST00000313737 1514 ntBASIC16.08■□□□□ 0.16
FREM3P0C091 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.08■□□□□ 0.16
FREM3P0C091 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.08■□□□□ 0.16
FREM3P0C091 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FREM3P0C091 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
FREM3P0C091 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.07■□□□□ 0.16
FREM3P0C091 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.07■□□□□ 0.16
FREM3P0C091 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.07■□□□□ 0.16
FREM3P0C091 AC022898.2-201ENST00000616822 1312 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FREM3P0C091 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FREM3P0C091 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FREM3P0C091 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 SIRPAP1-201ENST00000448467 1770 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.07■□□□□ 0.16
FREM3P0C091 FAAHP1-202ENST00000446499 1238 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms