Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM1P09493 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM1P09493 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM1P09493 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TPM1P09493 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM1P09493 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.57■□□□□ 0.72
TPM1P09493 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TPM1P09493 AC010240.3-201ENST00000607688 395 ntBASIC19.57■□□□□ 0.72
TPM1P09493 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM1P09493 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM1P09493 HLA-J-201ENST00000462773 1622 ntBASIC19.57■□□□□ 0.72
TPM1P09493 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM1P09493 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.57■□□□□ 0.72
TPM1P09493 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
TPM1P09493 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM1P09493 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TPM1P09493 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 AC132938.6-201ENST00000623828 1655 ntBASIC19.56■□□□□ 0.72
TPM1P09493 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM1P09493 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM1P09493 BX088651.1-201ENST00000540551 451 ntBASIC19.56■□□□□ 0.72
TPM1P09493 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM1P09493 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 AL023803.3-201ENST00000615559 522 ntBASIC19.56■□□□□ 0.72
TPM1P09493 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM1P09493 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TPM1P09493 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM1P09493 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM1P09493 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM1P09493 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TPM1P09493 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 ABHD17AP1-201ENST00000358206 933 ntBASIC19.55■□□□□ 0.72
TPM1P09493 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.55■□□□□ 0.72
TPM1P09493 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.55■□□□□ 0.72
TPM1P09493 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM1P09493 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
TPM1P09493 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM1P09493 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM1P09493 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM1P09493 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms