Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 AC011467.4-201ENST00000594891 528 ntBASIC17.87■□□□□ 0.45
RETP07949 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.87■□□□□ 0.45
RETP07949 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 AC064836.3-201ENST00000607928 673 ntBASIC17.87■□□□□ 0.45
RETP07949 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 AC009154.2-201ENST00000621177 724 ntBASIC17.87■□□□□ 0.45
RETP07949 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RETP07949 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RETP07949 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.87■□□□□ 0.45
RETP07949 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.87■□□□□ 0.45
RETP07949 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.87■□□□□ 0.45
RETP07949 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RETP07949 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RETP07949 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 AL035633.1-201ENST00000406139 838 ntBASIC17.86■□□□□ 0.45
RETP07949 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.86■□□□□ 0.45
RETP07949 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.86■□□□□ 0.45
RETP07949 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 PGM5P2-202ENST00000637225 1043 ntBASIC17.86■□□□□ 0.45
RETP07949 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RETP07949 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RETP07949 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RETP07949 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RETP07949 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RETP07949 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RETP07949 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.86■□□□□ 0.45
RETP07949 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
RETP07949 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
RETP07949 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 MIR770-201ENST00000390219 98 ntBASIC17.85■□□□□ 0.45
RETP07949 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.85■□□□□ 0.45
RETP07949 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.85■□□□□ 0.45
RETP07949 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RETP07949 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RETP07949 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RETP07949 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.85■□□□□ 0.45
RETP07949 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RETP07949 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.85■□□□□ 0.45
RETP07949 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
RETP07949 MIR4469-201ENST00000583919 79 ntBASIC17.85■□□□□ 0.45
RETP07949 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.85■□□□□ 0.45
RETP07949 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.85■□□□□ 0.45
RETP07949 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.85■□□□□ 0.45
RETP07949 MIR1199-201ENST00000621445 119 ntBASIC17.85■□□□□ 0.45
RETP07949 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 AC073592.3-201ENST00000625118 1834 ntBASIC17.85■□□□□ 0.45
RETP07949 ABALON-201ENST00000629058 1903 ntBASIC17.85■□□□□ 0.45
RETP07949 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.85■□□□□ 0.45
RETP07949 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RETP07949 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RETP07949 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 PCDHB18P-201ENST00000524813 2368 ntBASIC17.84■□□□□ 0.45
RETP07949 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.84■□□□□ 0.45
RETP07949 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RETP07949 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms