Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN1P07384 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN1P07384 AC020916.1-201ENST00000587762 1774 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CAPN1P07384 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN1P07384 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN1P07384 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 AP002383.4-201ENST00000442518 975 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 TSSC2-201ENST00000450217 709 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN1P07384 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN1P07384 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN1P07384 MIR3180-1-201ENST00000580374 94 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 MIR3180-3-201ENST00000584616 94 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN1P07384 AL121894.2-201ENST00000602977 491 ntBASIC17.48■□□□□ 0.39
CAPN1P07384 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN1P07384 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPN1P07384 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN1P07384 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN1P07384 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CAPN1P07384 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN1P07384 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CAPN1P07384 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN1P07384 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.47■□□□□ 0.39
CAPN1P07384 AL121672.3-201ENST00000608644 468 ntBASIC17.47■□□□□ 0.39
CAPN1P07384 AC012313.10-201ENST00000623509 926 ntBASIC17.47■□□□□ 0.39
CAPN1P07384 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN1P07384 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 AC100803.2-201ENST00000562459 1963 ntBASIC17.47■□□□□ 0.39
CAPN1P07384 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CAPN1P07384 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.47■□□□□ 0.39
CAPN1P07384 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN1P07384 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN1P07384 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPN1P07384 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CAPN1P07384 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 AL450487.1-201ENST00000426799 995 ntBASIC17.46■□□□□ 0.39
CAPN1P07384 BX276092.5-203ENST00000456199 560 ntBASIC17.46■□□□□ 0.39
CAPN1P07384 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.46■□□□□ 0.39
CAPN1P07384 RNF126P1-202ENST00000569893 925 ntBASIC17.46■□□□□ 0.39
CAPN1P07384 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CAPN1P07384 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CAPN1P07384 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms