Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.12■■□□□ 1.29
COL5A2P05997 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.12■■□□□ 1.29
COL5A2P05997 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.12■■□□□ 1.29
COL5A2P05997 AF228730.6-201ENST00000641497 218 ntBASIC23.12■■□□□ 1.29
COL5A2P05997 AC084121.3-201ENST00000641716 218 ntBASIC23.12■■□□□ 1.29
COL5A2P05997 AC105233.6-201ENST00000642093 218 ntBASIC23.12■■□□□ 1.29
COL5A2P05997 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.12■■□□□ 1.29
COL5A2P05997 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.12■■□□□ 1.29
COL5A2P05997 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.12■■□□□ 1.29
COL5A2P05997 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.12■■□□□ 1.29
COL5A2P05997 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.11■■□□□ 1.29
COL5A2P05997 SLC25A6P2-201ENST00000497974 877 ntBASIC23.11■■□□□ 1.29
COL5A2P05997 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.11■■□□□ 1.29
COL5A2P05997 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.11■■□□□ 1.29
COL5A2P05997 AC026120.1-201ENST00000611536 926 ntBASIC23.11■■□□□ 1.29
COL5A2P05997 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.11■■□□□ 1.29
COL5A2P05997 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.11■■□□□ 1.29
COL5A2P05997 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.11■■□□□ 1.29
COL5A2P05997 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.11■■□□□ 1.29
COL5A2P05997 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL5A2P05997 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COL5A2P05997 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL5A2P05997 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.1■■□□□ 1.29
COL5A2P05997 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
COL5A2P05997 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
COL5A2P05997 AC087163.2-201ENST00000457299 853 ntBASIC23.1■■□□□ 1.29
COL5A2P05997 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.1■■□□□ 1.29
COL5A2P05997 AC190387.1-201ENST00000551683 408 ntBASIC23.1■■□□□ 1.29
COL5A2P05997 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.1■■□□□ 1.29
COL5A2P05997 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.1■■□□□ 1.29
COL5A2P05997 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.1■■□□□ 1.29
COL5A2P05997 AL035252.4-201ENST00000624174 288 ntBASIC23.1■■□□□ 1.29
COL5A2P05997 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.1■■□□□ 1.29
COL5A2P05997 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL5A2P05997 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.09■■□□□ 1.29
COL5A2P05997 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.09■■□□□ 1.29
COL5A2P05997 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.09■■□□□ 1.29
COL5A2P05997 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 MYCLP1-201ENST00000372451 1075 ntBASIC23.09■■□□□ 1.29
COL5A2P05997 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 AC087641.1-201ENST00000557561 1021 ntBASIC23.09■■□□□ 1.29
COL5A2P05997 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.09■■□□□ 1.29
COL5A2P05997 AC116407.2-201ENST00000613639 860 ntBASIC23.09■■□□□ 1.29
COL5A2P05997 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.09■■□□□ 1.29
COL5A2P05997 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL5A2P05997 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.09■■□□□ 1.29
COL5A2P05997 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
COL5A2P05997 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
COL5A2P05997 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.08■■□□□ 1.29
COL5A2P05997 AC015922.1-201ENST00000421102 1152 ntBASIC23.08■■□□□ 1.29
COL5A2P05997 GPS2P2-201ENST00000430745 888 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms