Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTNP04004 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTNP04004 KLF4P1-201ENST00000412782 1185 ntBASIC19.38■□□□□ 0.69
VTNP04004 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.38■□□□□ 0.69
VTNP04004 PRYP5-201ENST00000451909 266 ntBASIC19.38■□□□□ 0.69
VTNP04004 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.38■□□□□ 0.69
VTNP04004 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.38■□□□□ 0.69
VTNP04004 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.38■□□□□ 0.69
VTNP04004 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.38■□□□□ 0.69
VTNP04004 TERC-201ENST00000602385 541 ntBASIC19.38■□□□□ 0.69
VTNP04004 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VTNP04004 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.38■□□□□ 0.69
VTNP04004 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.38■□□□□ 0.69
VTNP04004 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.38■□□□□ 0.69
VTNP04004 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTNP04004 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VTNP04004 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.37■□□□□ 0.69
VTNP04004 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.37■□□□□ 0.69
VTNP04004 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VTNP04004 UNC93B6-202ENST00000528242 690 ntBASIC19.37■□□□□ 0.69
VTNP04004 Z83851.2-201ENST00000609564 659 ntBASIC19.37■□□□□ 0.69
VTNP04004 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.37■□□□□ 0.69
VTNP04004 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.37■□□□□ 0.69
VTNP04004 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VTNP04004 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTNP04004 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 FLJ13224-201ENST00000313737 1514 ntBASIC19.36■□□□□ 0.69
VTNP04004 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
VTNP04004 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.36■□□□□ 0.69
VTNP04004 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 KRT18P27-201ENST00000427733 1299 ntBASIC19.36■□□□□ 0.69
VTNP04004 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.36■□□□□ 0.69
VTNP04004 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.36■□□□□ 0.69
VTNP04004 AL356488.2-201ENST00000602755 427 ntBASIC19.36■□□□□ 0.69
VTNP04004 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VTNP04004 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VTNP04004 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
VTNP04004 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTNP04004 KRT18P55-202ENST00000578578 1546 ntBASIC19.35■□□□□ 0.69
VTNP04004 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
VTNP04004 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 PMS2P7-201ENST00000506558 1336 ntBASIC19.35■□□□□ 0.69
VTNP04004 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.35■□□□□ 0.69
VTNP04004 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTNP04004 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.35■□□□□ 0.69
VTNP04004 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.35■□□□□ 0.69
VTNP04004 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.35■□□□□ 0.69
VTNP04004 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 AC140113.2-201ENST00000604370 208 ntBASIC19.35■□□□□ 0.69
VTNP04004 GPALPP1-207ENST00000611650 899 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms