Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRGV3P03979 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.98□□□□□ -0.17
TRGV3P03979 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 KRT18P55-202ENST00000578578 1546 ntBASIC13.97□□□□□ -0.17
TRGV3P03979 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV3P03979 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TRGV3P03979 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RN7SL606P-201ENST00000472779 293 ntBASIC13.97□□□□□ -0.17
TRGV3P03979 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.97□□□□□ -0.17
TRGV3P03979 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV3P03979 AP002414.4-201ENST00000589764 1148 ntBASIC13.97□□□□□ -0.17
TRGV3P03979 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
TRGV3P03979 NOC2LP2-201ENST00000407594 1944 ntBASIC13.97□□□□□ -0.17
TRGV3P03979 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV3P03979 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRGV3P03979 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV3P03979 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRGV3P03979 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
TRGV3P03979 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV3P03979 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRGV3P03979 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.96□□□□□ -0.17
TRGV3P03979 LINC00265-3P-201ENST00000447588 903 ntBASIC13.96□□□□□ -0.17
TRGV3P03979 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV3P03979 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV3P03979 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV3P03979 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV3P03979 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRGV3P03979 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV3P03979 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV3P03979 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRGV3P03979 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV3P03979 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms