Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CLDN1O95832 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN1O95832 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN1O95832 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN1O95832 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN1O95832 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN1O95832 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN1O95832 HLA-J-202ENST00000469281 1241 ntBASIC15.83■□□□□ 0.12
CLDN1O95832 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN1O95832 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN1O95832 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN1O95832 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN1O95832 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN1O95832 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN1O95832 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CLDN1O95832 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CLDN1O95832 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CLDN1O95832 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN1O95832 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.82■□□□□ 0.12
CLDN1O95832 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN1O95832 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 LAGE3P1-201ENST00000425356 484 ntBASIC15.82■□□□□ 0.12
CLDN1O95832 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN1O95832 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN1O95832 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN1O95832 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 AC125634.1-201ENST00000438758 1403 ntBASIC15.82■□□□□ 0.12
CLDN1O95832 KRT8P50-201ENST00000562022 1438 ntBASIC15.82■□□□□ 0.12
CLDN1O95832 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN1O95832 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN1O95832 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN1O95832 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN1O95832 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CLDN1O95832 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN1O95832 AC113404.2-201ENST00000507884 177 ntBASIC15.81■□□□□ 0.12
CLDN1O95832 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN1O95832 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN1O95832 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN1O95832 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN1O95832 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 AC097374.2-201ENST00000618617 1306 ntBASIC15.81■□□□□ 0.12
CLDN1O95832 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN1O95832 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN1O95832 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN1O95832 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms