Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VAPBO95292 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.84■□□□□ 0.45
VAPBO95292 DDX43P3-201ENST00000441064 443 ntBASIC17.84■□□□□ 0.45
VAPBO95292 SPDYE13P-201ENST00000445314 798 ntBASIC17.84■□□□□ 0.45
VAPBO95292 DUX4L26-201ENST00000489078 1255 ntBASIC17.84■□□□□ 0.45
VAPBO95292 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 AC108860.2-201ENST00000562760 2183 ntBASIC17.84■□□□□ 0.45
VAPBO95292 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VAPBO95292 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
VAPBO95292 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.83■□□□□ 0.45
VAPBO95292 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VAPBO95292 Z83836.1-201ENST00000624605 1642 ntBASIC17.83■□□□□ 0.45
VAPBO95292 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
VAPBO95292 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
VAPBO95292 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAPBO95292 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 TMPOP1-202ENST00000424642 1267 ntBASIC17.83■□□□□ 0.44
VAPBO95292 MTCL1P1-201ENST00000446207 792 ntBASIC17.83■□□□□ 0.44
VAPBO95292 AC068472.1-201ENST00000474589 881 ntBASIC17.83■□□□□ 0.44
VAPBO95292 AL390719.2-201ENST00000606993 987 ntBASIC17.83■□□□□ 0.44
VAPBO95292 AC083849.1-201ENST00000615227 514 ntBASIC17.83■□□□□ 0.44
VAPBO95292 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.83■□□□□ 0.44
VAPBO95292 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.83■□□□□ 0.44
VAPBO95292 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
VAPBO95292 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.83■□□□□ 0.44
VAPBO95292 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.83■□□□□ 0.44
VAPBO95292 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.83■□□□□ 0.44
VAPBO95292 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAPBO95292 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VAPBO95292 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VAPBO95292 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 SIRPAP1-201ENST00000448467 1770 ntBASIC17.82■□□□□ 0.44
VAPBO95292 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.82■□□□□ 0.44
VAPBO95292 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.82■□□□□ 0.44
VAPBO95292 AL671277.2-201ENST00000458060 996 ntBASIC17.82■□□□□ 0.44
VAPBO95292 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.82■□□□□ 0.44
VAPBO95292 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.82■□□□□ 0.44
VAPBO95292 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.82■□□□□ 0.44
VAPBO95292 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.82■□□□□ 0.44
VAPBO95292 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.82■□□□□ 0.44
VAPBO95292 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.82■□□□□ 0.44
VAPBO95292 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.82■□□□□ 0.44
VAPBO95292 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 HLA-J-201ENST00000462773 1622 ntBASIC17.82■□□□□ 0.44
VAPBO95292 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAPBO95292 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms