Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDH8O95206 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH8O95206 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH8O95206 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH8O95206 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH8O95206 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDH8O95206 AC100803.2-201ENST00000562459 1963 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH8O95206 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 AC103564.2-201ENST00000432853 1299 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDH8O95206 NKAPP1-205ENST00000585790 367 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH8O95206 AL139288.1-201ENST00000623748 933 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 AP000867.4-201ENST00000641616 219 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH8O95206 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH8O95206 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDH8O95206 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDH8O95206 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH8O95206 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 IL9RP2-201ENST00000423948 1312 ntBASIC17.7■□□□□ 0.42
PCDH8O95206 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH8O95206 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 SIRPAP1-201ENST00000448467 1770 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 COX5BP2-201ENST00000392354 334 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH8O95206 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 RPS2P1-201ENST00000434010 821 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 HNRNPDP1-201ENST00000439535 754 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH8O95206 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH8O95206 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 AL049840.3-201ENST00000602669 611 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH8O95206 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 FAM215A-202ENST00000632077 792 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 AP000997.3-201ENST00000623333 2250 ntBASIC17.69■□□□□ 0.42
PCDH8O95206 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDH8O95206 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH8O95206 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
PCDH8O95206 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms