Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
KRT33AO76009 AP003733.1-201ENST00000491725 852 ntBASIC16.12■□□□□ 0.17
KRT33AO76009 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT33AO76009 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.12■□□□□ 0.17
KRT33AO76009 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 AL445228.2-201ENST00000605589 952 ntBASIC16.12■□□□□ 0.17
KRT33AO76009 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT33AO76009 AC135776.1-201ENST00000319817 2481 ntBASIC16.12■□□□□ 0.17
KRT33AO76009 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT33AO76009 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT33AO76009 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT33AO76009 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT33AO76009 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KRT33AO76009 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 AC012317.2-201ENST00000623305 2251 ntBASIC16.11■□□□□ 0.17
KRT33AO76009 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
KRT33AO76009 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 HLA-F-220ENST00000434407 884 ntBASIC16.11■□□□□ 0.17
KRT33AO76009 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT33AO76009 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT33AO76009 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 PKD1P5-201ENST00000532415 10291 ntBASIC16.11■□□□□ 0.17
KRT33AO76009 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
KRT33AO76009 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT33AO76009 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
KRT33AO76009 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 AL031133.1-201ENST00000406807 723 ntBASIC16.1■□□□□ 0.17
KRT33AO76009 AL645929.1-201ENST00000420084 975 ntBASIC16.1■□□□□ 0.17
KRT33AO76009 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT33AO76009 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 AL121956.5-201ENST00000625261 221 ntBASIC16.1■□□□□ 0.17
KRT33AO76009 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT33AO76009 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms