Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL121672.3-201ENST00000608644 468 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 AL358472.4-201ENST00000633140 710 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 AC080080.1-201ENST00000625121 2420 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 IER3-202ENST00000376377 1350 ntBASIC17.04■□□□□ 0.32
PRAMEF4O60810 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.04■□□□□ 0.32
PRAMEF4O60810 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF4O60810 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF4O60810 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 TSSC2-201ENST00000450217 709 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 MIR3180-1-201ENST00000580374 94 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 MIR3180-3-201ENST00000584616 94 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 AC010331.1-201ENST00000611423 582 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 LYSMD4-203ENST00000378904 2122 ntBASIC17.03■□□□□ 0.32
PRAMEF4O60810 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF4O60810 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF4O60810 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF4O60810 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF4O60810 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms