Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 PHGDH-209ENST00000641074 1780 ntBASIC16.6■□□□□ 0.25
HCN1O60741 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 MIR149-201ENST00000384879 89 ntBASIC16.6■□□□□ 0.25
HCN1O60741 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HCN1O60741 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.6■□□□□ 0.25
HCN1O60741 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.6■□□□□ 0.25
HCN1O60741 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HCN1O60741 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 Z83836.1-201ENST00000624605 1642 ntBASIC16.59■□□□□ 0.25
HCN1O60741 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
HCN1O60741 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 CROCCP1-201ENST00000426910 5675 ntBASIC16.59■□□□□ 0.25
HCN1O60741 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.59■□□□□ 0.25
HCN1O60741 DUSP5P1-201ENST00000441325 1139 ntBASIC16.59■□□□□ 0.25
HCN1O60741 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HCN1O60741 RNF126P1-202ENST00000569893 925 ntBASIC16.59■□□□□ 0.25
HCN1O60741 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCN1O60741 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.59■□□□□ 0.25
HCN1O60741 MIR3652-201ENST00000579335 131 ntBASIC16.59■□□□□ 0.25
HCN1O60741 AC090616.6-201ENST00000582640 721 ntBASIC16.59■□□□□ 0.25
HCN1O60741 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 AC005332.3-201ENST00000589904 676 ntBASIC16.59■□□□□ 0.25
HCN1O60741 AC008687.5-201ENST00000593746 558 ntBASIC16.59■□□□□ 0.25
HCN1O60741 GPR32P1-201ENST00000601788 811 ntBASIC16.59■□□□□ 0.25
HCN1O60741 AL390719.2-201ENST00000606993 987 ntBASIC16.59■□□□□ 0.25
HCN1O60741 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.59■□□□□ 0.25
HCN1O60741 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HCN1O60741 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HCN1O60741 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HCN1O60741 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCN1O60741 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.58■□□□□ 0.25
HCN1O60741 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HCN1O60741 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HCN1O60741 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCN1O60741 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCN1O60741 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCN1O60741 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
HCN1O60741 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms