Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 DUTP2-201ENST00000519164 463 ntBASIC14.5□□□□□ -0.09
SSSCA1O60232 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 MIR6786-201ENST00000616843 113 ntBASIC14.5□□□□□ -0.09
SSSCA1O60232 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.5□□□□□ -0.09
SSSCA1O60232 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.5□□□□□ -0.09
SSSCA1O60232 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSSCA1O60232 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.49□□□□□ -0.09
SSSCA1O60232 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.49□□□□□ -0.09
SSSCA1O60232 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SSSCA1O60232 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SSSCA1O60232 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SSSCA1O60232 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.49□□□□□ -0.09
SSSCA1O60232 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SSSCA1O60232 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SSSCA1O60232 AGGF1P2-201ENST00000426656 2106 ntBASIC14.49□□□□□ -0.09
SSSCA1O60232 AL353807.1-201ENST00000427475 662 ntBASIC14.49□□□□□ -0.09
SSSCA1O60232 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
SSSCA1O60232 AC026366.1-201ENST00000488803 879 ntBASIC14.49□□□□□ -0.09
SSSCA1O60232 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.49□□□□□ -0.09
SSSCA1O60232 AC009065.1-201ENST00000564055 1225 ntBASIC14.49□□□□□ -0.09
SSSCA1O60232 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
SSSCA1O60232 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SSSCA1O60232 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 CICP6-201ENST00000457191 2729 ntBASIC14.49□□□□□ -0.09
SSSCA1O60232 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.49□□□□□ -0.09
SSSCA1O60232 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSSCA1O60232 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.48□□□□□ -0.09
SSSCA1O60232 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SSSCA1O60232 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.48□□□□□ -0.09
SSSCA1O60232 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.48□□□□□ -0.09
SSSCA1O60232 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.48□□□□□ -0.09
SSSCA1O60232 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.48□□□□□ -0.09
SSSCA1O60232 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 AC132938.6-201ENST00000623828 1655 ntBASIC14.48□□□□□ -0.09
SSSCA1O60232 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms