Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA3O43365 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA3O43365 AC098831.1-202ENST00000438821 336 ntBASIC14.25□□□□□ -0.13
HOXA3O43365 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HOXA3O43365 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HOXA3O43365 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
HOXA3O43365 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
HOXA3O43365 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HOXA3O43365 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HOXA3O43365 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 LTB4R2-202ENST00000528054 3092 ntBASIC14.25□□□□□ -0.13
HOXA3O43365 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA3O43365 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXA3O43365 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA3O43365 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXA3O43365 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXA3O43365 PHGDH-209ENST00000641074 1780 ntBASIC14.24□□□□□ -0.13
HOXA3O43365 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXA3O43365 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HOXA3O43365 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.24□□□□□ -0.13
HOXA3O43365 IGHV3-22-201ENST00000520721 359 ntBASIC14.24□□□□□ -0.13
HOXA3O43365 AC012640.2-201ENST00000561606 901 ntBASIC14.24□□□□□ -0.13
HOXA3O43365 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXA3O43365 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 AP000867.4-201ENST00000641616 219 ntBASIC14.24□□□□□ -0.13
HOXA3O43365 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
HOXA3O43365 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXA3O43365 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXA3O43365 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA3O43365 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HOXA3O43365 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
HOXA3O43365 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HOXA3O43365 OR6D1P-202ENST00000641007 5290 ntBASIC14.23□□□□□ -0.13
HOXA3O43365 HTR7P1-202ENST00000624664 4411 ntBASIC14.23□□□□□ -0.13
HOXA3O43365 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HOXA3O43365 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXA3O43365 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXA3O43365 MIR1233-2-201ENST00000408138 82 ntBASIC14.23□□□□□ -0.13
HOXA3O43365 MIR1233-1-201ENST00000408722 82 ntBASIC14.23□□□□□ -0.13
HOXA3O43365 BX842568.4-201ENST00000421222 227 ntBASIC14.23□□□□□ -0.13
HOXA3O43365 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms