Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC099343.3-201ENST00000605834 2503 ntBASIC16.63■□□□□ 0.25
RRP8O43159 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RRP8O43159 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.63■□□□□ 0.25
RRP8O43159 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
RRP8O43159 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 AC093503.3-201ENST00000624917 2352 ntBASIC16.63■□□□□ 0.25
RRP8O43159 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.62■□□□□ 0.25
RRP8O43159 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 AC005034.1-201ENST00000426657 489 ntBASIC16.62■□□□□ 0.25
RRP8O43159 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.62■□□□□ 0.25
RRP8O43159 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.62■□□□□ 0.25
RRP8O43159 AC122714.2-201ENST00000502787 707 ntBASIC16.62■□□□□ 0.25
RRP8O43159 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.62■□□□□ 0.25
RRP8O43159 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RRP8O43159 AC008667.4-201ENST00000607370 168 ntBASIC16.62■□□□□ 0.25
RRP8O43159 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RRP8O43159 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RRP8O43159 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RRP8O43159 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.61■□□□□ 0.25
RRP8O43159 ELK2BP-201ENST00000415014 1224 ntBASIC16.61■□□□□ 0.25
RRP8O43159 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.61■□□□□ 0.25
RRP8O43159 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.61■□□□□ 0.25
RRP8O43159 FAM58CP-201ENST00000435741 640 ntBASIC16.61■□□□□ 0.25
RRP8O43159 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.61■□□□□ 0.25
RRP8O43159 IGHV3-65-201ENST00000523210 341 ntBASIC16.61■□□□□ 0.25
RRP8O43159 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RRP8O43159 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.61■□□□□ 0.25
RRP8O43159 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.61■□□□□ 0.25
RRP8O43159 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 AC004790.2-201ENST00000623588 572 ntBASIC16.61■□□□□ 0.25
RRP8O43159 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.61■□□□□ 0.25
RRP8O43159 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RRP8O43159 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.6■□□□□ 0.25
RRP8O43159 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
RRP8O43159 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 AL032819.2-201ENST00000624543 2162 ntBASIC16.6■□□□□ 0.25
RRP8O43159 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.6■□□□□ 0.25
RRP8O43159 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 AL020989.1-201ENST00000422979 469 ntBASIC16.6■□□□□ 0.25
RRP8O43159 AC103564.2-201ENST00000432853 1299 ntBASIC16.6■□□□□ 0.25
RRP8O43159 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 FAM86GP-201ENST00000448322 971 ntBASIC16.6■□□□□ 0.25
RRP8O43159 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 RPS15P9-201ENST00000494093 319 ntBASIC16.6■□□□□ 0.25
RRP8O43159 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.6■□□□□ 0.25
RRP8O43159 AC010654.1-201ENST00000615722 808 ntBASIC16.6■□□□□ 0.25
RRP8O43159 AD001527.2-201ENST00000622994 785 ntBASIC16.6■□□□□ 0.25
RRP8O43159 AC004877.2-201ENST00000623941 599 ntBASIC16.6■□□□□ 0.25
RRP8O43159 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms