Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC116562.2-201ENST00000507042 360 ntBASIC16.89■□□□□ 0.29
CLOCKO15516 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 AC012306.2-201ENST00000609350 630 ntBASIC16.89■□□□□ 0.29
CLOCKO15516 AC008622.2-201ENST00000617006 1229 ntBASIC16.89■□□□□ 0.29
CLOCKO15516 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLOCKO15516 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLOCKO15516 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.89■□□□□ 0.29
CLOCKO15516 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.88■□□□□ 0.29
CLOCKO15516 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLOCKO15516 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLOCKO15516 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CLOCKO15516 AL513477.1-201ENST00000602865 2407 ntBASIC16.88■□□□□ 0.29
CLOCKO15516 FSCN1P1-201ENST00000568912 1481 ntBASIC16.88■□□□□ 0.29
CLOCKO15516 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.88■□□□□ 0.29
CLOCKO15516 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.88■□□□□ 0.29
CLOCKO15516 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 MIR149-201ENST00000384879 89 ntBASIC16.88■□□□□ 0.29
CLOCKO15516 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.88■□□□□ 0.29
CLOCKO15516 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.88■□□□□ 0.29
CLOCKO15516 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.88■□□□□ 0.29
CLOCKO15516 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CLOCKO15516 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLOCKO15516 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLOCKO15516 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLOCKO15516 LINC01568-207ENST00000641790 1380 ntBASIC16.88■□□□□ 0.29
CLOCKO15516 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CLOCKO15516 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 RCN1P1-201ENST00000400413 996 ntBASIC16.87■□□□□ 0.29
CLOCKO15516 AL023284.2-201ENST00000405850 579 ntBASIC16.87■□□□□ 0.29
CLOCKO15516 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.87■□□□□ 0.29
CLOCKO15516 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.87■□□□□ 0.29
CLOCKO15516 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 AC005363.2-201ENST00000618631 242 ntBASIC16.87■□□□□ 0.29
CLOCKO15516 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLOCKO15516 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLOCKO15516 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLOCKO15516 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 CICP6-201ENST00000457191 2729 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 PCDHB19P-201ENST00000570871 2371 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 TMPOP1-202ENST00000424642 1267 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 MCCD1P1-208ENST00000445732 328 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.86■□□□□ 0.29
CLOCKO15516 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 FITM1-202ENST00000559294 800 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms