Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 AC004263.2-201ENST00000617183 678 ntBASIC16.83■□□□□ 0.28
UPK1AO00322 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.83■□□□□ 0.28
UPK1AO00322 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UPK1AO00322 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
UPK1AO00322 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UPK1AO00322 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1AO00322 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1AO00322 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1AO00322 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
UPK1AO00322 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UPK1AO00322 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 AP003733.1-201ENST00000491725 852 ntBASIC16.82■□□□□ 0.28
UPK1AO00322 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.82■□□□□ 0.28
UPK1AO00322 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.82■□□□□ 0.28
UPK1AO00322 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.82■□□□□ 0.28
UPK1AO00322 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1AO00322 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1AO00322 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.82■□□□□ 0.28
UPK1AO00322 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
UPK1AO00322 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.81■□□□□ 0.28
UPK1AO00322 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 AC022898.2-201ENST00000616822 1312 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UPK1AO00322 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 IGHGP-201ENST00000390555 1178 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
UPK1AO00322 KRT18P65-201ENST00000439811 1286 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 SPDYE13P-201ENST00000445314 798 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.81■□□□□ 0.28
UPK1AO00322 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.81■□□□□ 0.28
UPK1AO00322 LINC01238-205ENST00000567549 1107 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.81■□□□□ 0.28
UPK1AO00322 AC083849.1-201ENST00000615227 514 ntBASIC16.81■□□□□ 0.28
UPK1AO00322 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.81■□□□□ 0.28
UPK1AO00322 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
UPK1AO00322 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1AO00322 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1AO00322 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
UPK1AO00322 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1AO00322 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1AO00322 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.8■□□□□ 0.28
UPK1AO00322 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.8■□□□□ 0.28
UPK1AO00322 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.8■□□□□ 0.28
UPK1AO00322 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.8■□□□□ 0.28
UPK1AO00322 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1AO00322 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.8■□□□□ 0.28
UPK1AO00322 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1AO00322 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms