Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.75■□□□□ 0.27
CLIC1O00299 AC141257.4-201ENST00000634557 245 ntBASIC16.75■□□□□ 0.27
CLIC1O00299 AC136944.6-201ENST00000634818 245 ntBASIC16.75■□□□□ 0.27
CLIC1O00299 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLIC1O00299 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 LINC01568-207ENST00000641790 1380 ntBASIC16.75■□□□□ 0.27
CLIC1O00299 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.75■□□□□ 0.27
CLIC1O00299 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLIC1O00299 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.75■□□□□ 0.27
CLIC1O00299 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.74■□□□□ 0.27
CLIC1O00299 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLIC1O00299 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 NKILA-202ENST00000614771 2598 ntBASIC16.74■□□□□ 0.27
CLIC1O00299 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.74■□□□□ 0.27
CLIC1O00299 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLIC1O00299 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLIC1O00299 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLIC1O00299 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLIC1O00299 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLIC1O00299 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLIC1O00299 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.73■□□□□ 0.27
CLIC1O00299 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.73■□□□□ 0.27
CLIC1O00299 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.73■□□□□ 0.27
CLIC1O00299 AC011676.5-201ENST00000624864 2660 ntBASIC16.73■□□□□ 0.27
CLIC1O00299 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.73■□□□□ 0.27
CLIC1O00299 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLIC1O00299 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 KRT18P22-201ENST00000402024 1347 ntBASIC16.72■□□□□ 0.27
CLIC1O00299 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms