Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 AL390754.1-201ENST00000619088 582 ntBASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 AFG3L1P-217ENST00000557444 2447 ntBASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL6A6A6NMZ7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.89■□□□□ 0.14
COL6A6A6NMZ7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 KLF2P3-201ENST00000451977 1087 ntBASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 AL662799.1-202ENST00000614205 422 ntBASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL6A6A6NMZ7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 ACA64.2-201ENST00000459014 129 ntBASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC099522.2-201ENST00000607001 744 ntBASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 MIR6799-201ENST00000620297 69 ntBASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 FAM58DP-201ENST00000428076 619 ntBASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AC112191.1-201ENST00000523689 701 ntBASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL6A6A6NMZ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 AC092919.2-201ENST00000623631 1645 ntBASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 AL592309.1-201ENST00000443127 649 ntBASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.87■□□□□ 0.13
COL6A6A6NMZ7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms