Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT2A6NDA9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT2A6NDA9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT2A6NDA9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 HLA-J-201ENST00000462773 1622 ntBASIC16.86■□□□□ 0.29
LRIT2A6NDA9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 AC012615.1-201ENST00000565797 1299 ntBASIC16.86■□□□□ 0.29
LRIT2A6NDA9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.86■□□□□ 0.29
LRIT2A6NDA9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AC005104.2-201ENST00000427818 678 ntBASIC16.85■□□□□ 0.29
LRIT2A6NDA9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AC104819.1-201ENST00000504587 486 ntBASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TP73-AS1-210ENST00000637775 1455 ntBASIC16.85■□□□□ 0.29
LRIT2A6NDA9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRIT2A6NDA9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 FAM220CP-201ENST00000395253 831 ntBASIC16.84■□□□□ 0.29
LRIT2A6NDA9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 AC122714.2-201ENST00000502787 707 ntBASIC16.84■□□□□ 0.29
LRIT2A6NDA9 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 BNIP3P18-201ENST00000593976 575 ntBASIC16.84■□□□□ 0.29
LRIT2A6NDA9 AC011467.2-201ENST00000598425 242 ntBASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIT2A6NDA9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms