Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LOC102724428A0A0B4J2F2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LOC102724428A0A0B4J2F2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC116407.2-201ENST00000613639 860 ntBASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
LOC102724428A0A0B4J2F2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC092919.2-201ENST00000623631 1645 ntBASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
LOC102724428A0A0B4J2F2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 DDX43P3-201ENST00000441064 443 ntBASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC005498.2-205ENST00000593218 784 ntBASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.39■■□□□ 1.17
LOC102724428A0A0B4J2F2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 PAWRP1-201ENST00000451083 565 ntBASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC023141.5-201ENST00000458585 616 ntBASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.38■■□□□ 1.17
LOC102724428A0A0B4J2F2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AL590787.1-201ENST00000568856 1315 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 FAM185BP-201ENST00000443595 716 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC002558.1-201ENST00000488906 803 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC025678.2-201ENST00000562061 970 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC239800.4-201ENST00000603712 296 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC006116.8-202ENST00000587620 1550 ntBASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms