Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 AC141257.4-201ENST00000634557 245 ntBASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 AC136944.6-201ENST00000634818 245 ntBASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC132938.6-201ENST00000623828 1655 ntBASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC024563.2-201ENST00000603282 481 ntBASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC140113.3-201ENST00000605663 199 ntBASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV30A0A087WSZ9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 LIN28AP1-201ENST00000429574 405 ntBASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 KRT18P65-201ENST00000439811 1286 ntBASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms