Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 WIZP1-201ENST00000531444 2299 ntBASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AC012640.2-201ENST00000561606 901 ntBASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AL022326.1-202ENST00000641533 845 ntBASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 AC104109.2-201ENST00000602919 1418 ntBASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1G3Q9Y6M4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 COX5BP2-201ENST00000392354 334 ntBASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 AC010460.3-201ENST00000511359 1579 ntBASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 Z83851.2-201ENST00000609564 659 ntBASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1G3Q9Y6M4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 PHGDH-209ENST00000641074 1780 ntBASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1G3Q9Y6M4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 MIR940-201ENST00000401276 94 ntBASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 RNA5SP415-201ENST00000517246 115 ntBASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AC092865.5-201ENST00000545435 363 ntBASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AC034105.1-201ENST00000563488 319 ntBASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms