Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 BASP1P1-201ENST00000430708 665 ntBASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AC055876.3-201ENST00000431496 288 ntBASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AC138649.4-201ENST00000612222 287 ntBASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCH2Q9Y6C5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 TFAMP1-201ENST00000412727 736 ntBASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 TIMM8BP1-201ENST00000452384 211 ntBASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 UGT1A2P-201ENST00000454886 866 ntBASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCH2Q9Y6C5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 AC005082.1-201ENST00000413042 2259 ntBASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 ADH5P3-201ENST00000433842 1137 ntBASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 DDX43P3-201ENST00000441064 443 ntBASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 MEIS3P1-201ENST00000495167 958 ntBASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCH2Q9Y6C5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PTCH2Q9Y6C5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
PTCH2Q9Y6C5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 AC003669.1-201ENST00000334569 611 ntBASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 CXCL1P1-201ENST00000502804 216 ntBASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCH2Q9Y6C5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms