Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AC007613.1-201ENST00000572811 2597 ntBASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 COX5BP2-201ENST00000392354 334 ntBASIC19■□□□□ 0.63
SNX9Q9Y5X1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 REXO1L6P-202ENST00000619970 1078 ntBASIC19■□□□□ 0.63
SNX9Q9Y5X1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 AC090340.1-201ENST00000620778 4980 ntBASIC19■□□□□ 0.63
SNX9Q9Y5X1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19■□□□□ 0.63
SNX9Q9Y5X1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SNX9Q9Y5X1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX9Q9Y5X1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX9Q9Y5X1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms