Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 IGHV3-52-201ENST00000519770 353 ntBASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC092364.2-202ENST00000597012 1073 ntBASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 SLC25A6P2-201ENST00000497974 877 ntBASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPBQ9Y5S2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 AL390955.2-201ENST00000603032 514 ntBASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPBQ9Y5S2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 AL513480.1-201ENST00000451731 511 ntBASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 CCDC74BP1-201ENST00000508880 1123 ntBASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPBQ9Y5S2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 AC107918.2-201ENST00000530817 355 ntBASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPBQ9Y5S2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPBQ9Y5S2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.51■■□□□ 1.84
CDC42BPBQ9Y5S2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms